BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G06SP1|AL425756
(774 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1431 1504 0.0
>3x_Contig1431
Length = 10954
Score = 1504 bits (752), Expect = 0.0
Identities = 764/774 (98%)
Strand = Plus / Plus
Query: 1 agcctcaatttctttaaagatctcaaaacgagttccaaacgagtttatctccaattcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5905 agcctcaatttctttaaagatctcaaaacgagttccaaacgagtttatctccaattcctt 5964
Query: 61 caaatgcgctaattctagttccaaaagaattgtacctgaratkktatgcttttggaacct 120
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5965 caaatgcgctaattctagttccaaaagaattgtacctgaaattttatgcttttggaacct 6024
Query: 121 cgatgctgattccacatcgaatcccaatgagatgaggtaagckgtaacctgttccggaac 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6025 cgatgctgattccacatcgaatcccaatgagatgaggtaagctgtaacctgttccggaac 6084
Query: 181 ccaattcttcacattttctgggcgtaattcgttggttccagtagaagccaggctattact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6085 ccaattcttcacattttctgggcgtaattcgttggttccagtagaagccaggctattact 6144
Query: 241 tttggtgaaawctaatgatgaacctgaaacaagtcttttcaacccaggtctttgatcata 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6145 tttggtgaaatctaatgatgaacctgaaacaagtcttttcaacccaggtctttgatcata 6204
Query: 301 atcgatggaatcagttccagaggggaaagagtcaccccttaactcttcaagtgccttatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6205 atcgatggaatcagttccagaggggaaagagtcaccccttaactcttcaagtgccttatc 6264
Query: 361 tatatcactcattgtgcttttcattgatatgttcctatccacaggaacttttatcatgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6265 tatatcactcattgtgcttttcattgatatgttcctatccacaggaacttttatcatgtc 6324
Query: 421 tgagtkgggcgctttgatattatcaaatttcctataagtkgcgggttgtgcagtttctaa 480
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6325 tgagttgggcgctttgatattatcaaatttcctataagttgcgggttgtgcagtttctaa 6384
Query: 481 cggctgaggggtaggtagctcactggtggacccatcctgggacgggtatgaragarttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 6385 cggctgaggggtaggtagctcactggtggacccatcctgggacgggtatgaaagatttgt 6444
Query: 541 attgcttccagaggcaaacggacttgcgattctcttggagctttttgccctcatcagggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6445 attgcttccagaggcaaacggacttgcgattctcttggagctttttgccctcatcagggc 6504
Query: 601 tggtttgcgttccatagcaatgacttgagtgaaaackttgggatacaggccttcttcttg 660
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6505 tggtttgcgttccatagcaatgacttgagtgaaaactttgggatacaggccttcttcttg 6564
Query: 661 tgttcttagattcttaccaaaataccaaccatcgttatacgacccatcatcggtgaccac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6565 tgttcttagattcttaccaaaataccaaccatcgttatacgacccatcatcggtgaccac 6624
Query: 721 ttgaatcttgtctccaggcctcatatctagttcgtcatccatacgcttactgta 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6625 ttgaatcttgtctccaggcctcatatctagttcgtcatccatacgcttactgta 6678
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4933
Number of Sequences: 1807
Number of extensions: 4933
Number of successful extensions: 116
Number of sequences better than 1.0e-20: 1
length of query: 774
length of database: 10,358,551
effective HSP length: 16
effective length of query: 758
effective length of database: 10,329,639
effective search space: 7829866362
effective search space used: 7829866362
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)